Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH90506.1Zn-dependent hydrolase, glyoxylase; Function of strongly homologous gene; enzyme. (202 aa)    
Predicted Functional Partners:
CCH90507.1
NAD/mycothiol-dependent formaldehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    0.947
CCH88762.1
Putative enzymemetal binding hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 
0.809
purM
Phosphoribosylformylglycinamidine cyclo-ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.568
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
       0.568
CCH90528.1
Homologs of previously reported genes of unknown function.
  
     0.536
moeB
Molybdopterin-synthase sulfurylase; Function of strongly homologous gene; enzyme.
  
 0.533
CCH86254.1
Putative Rhodanese-related sulfurtransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.504
CCH85973.1
Homologs of previously reported genes of unknown function.
  
  
  0.500
CCH90508.1
Major Facilitator Superfamily transporter; Function of strongly homologous gene; transporter.
       0.476
CCH90509.1
Homologs of previously reported genes of unknown function.
       0.476
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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