STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpQ-2Glycerophosphoryl diester phosphodiesterase; Function of strongly homologous gene; enzyme. (348 aa)    
Predicted Functional Partners:
eutC
Ethanolamine ammonia-lyase light chain (Ethanolamine ammonia-lyase small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the EutC family.
     
  0.900
eutB
Ethanolamine ammonia-lyase heavy chain (Ethanolamine ammonia-lyase large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
purD
Phosphoribosylamine--glycine ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family.
     
 0.585
rsgA-2
Ribosome biogenesis GTPase rsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.569
CCH87572.1
Putative alkaline phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.546
CCH89623.1
Alkaline phosphatase; Function of strongly homologous gene; enzyme; Belongs to the alkaline phosphatase family.
 
  
 0.489
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.462
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.462
CCH88231.1
Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.401
CCH89064.1
Aquaporin NIP1-1; Function of strongly homologous gene; transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.401
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.