STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH90560.1Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (321 aa)    
Predicted Functional Partners:
CCH90559.1
Protein of unknown function; No homology to any previously reported sequences.
       0.586
CCH90561.1
Cyanate permease; Function of strongly homologous gene; transporter.
       0.565
CCH85815.1
Homologs of previously reported genes of unknown function.
 
     0.557
CCH89739.1
Homologs of previously reported genes of unknown function.
  
     0.517
CCH89738.1
Homologs of previously reported genes of unknown function.
  
     0.516
CCH90558.1
Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.449
CCH90664.1
Putative abortive infection protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
    0.430
CCH88029.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.417
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.