STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpFGlycerol uptake facilitator protein; Function of strongly homologous gene; transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family. (300 aa)    
Predicted Functional Partners:
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM; Function of strongly homologous gene; enzyme.
 
  
 0.808
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 0.787
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 0.783
dhaL
PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL (Glycerone kinase) (DHA kinase); Function of strongly homologous gene; enzyme.
  
  
 0.777
dhaK
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit dhaK; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
  
  
 0.776
glpD-2
Glycerol-3-phosphate dehydrogenase 2; Function of strongly homologous gene; enzyme; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.753
glpD
Glycerol-3-phosphate dehydrogenase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.690
CCH87930.1
Protein of unknown function; No homology to any previously reported sequences.
   
 
 0.627
CCH90576.1
Zinc-type alcohol dehydrogenase-like protein yycR; Function of strongly homologous gene; enzyme.
  
   0.479
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
   
  
 0.463
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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