STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaKPTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit dhaK; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme. (333 aa)    
Predicted Functional Partners:
dhaL
PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL (Glycerone kinase) (DHA kinase); Function of strongly homologous gene; enzyme.
  
 0.999
dhaM
PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM; Function of strongly homologous gene; enzyme.
 0.999
glpD-2
Glycerol-3-phosphate dehydrogenase 2; Function of strongly homologous gene; enzyme; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.830
glpD
Glycerol-3-phosphate dehydrogenase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.826
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Function of strongly homologous gene; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 
 0.817
glpF
Glycerol uptake facilitator protein; Function of strongly homologous gene; transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.776
pyk
Pyruvate kinase; Function of strongly homologous gene; enzyme; Belongs to the pyruvate kinase family.
 
  
 0.658
CCH85756.1
Putative phytochrome sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
   
 
 0.493
CCH87681.1
Sigma54 specific transcriptional regulator, Fis family; Function of strongly homologous gene; factor.
   
 
 0.493
CCH90743.1
Putative phytochrome sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
 
 0.493
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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