STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH90583.1Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (114 aa)    
Predicted Functional Partners:
CCH90582.1
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase; Function of strongly homologous gene; enzyme.
       0.768
CCH87769.1
Homologs of previously reported genes of unknown function.
  
     0.688
CCH90581.1
Naringenin-chalcone synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.596
CCH90584.1
Homologs of previously reported genes of unknown function.
       0.561
CCH86632.1
Homologs of previously reported genes of unknown function.
  
     0.532
CCH90392.1
Homologs of previously reported genes of unknown function.
  
     0.486
CCH90440.1
Homologs of previously reported genes of unknown function.
 
     0.485
CCH86625.1
Putative lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.476
CCH90868.1
Homologs of previously reported genes of unknown function.
 
     0.461
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.458
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.