STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS80167.1Pimeloyl-ACP methyl ester carboxylesterase. (267 aa)    
Predicted Functional Partners:
SIS80185.1
N-acetylglucosaminyltransferase; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
       0.724
SIS80135.1
Hypothetical protein.
  
 
 0.642
SIS80201.1
Peptide/nickel transport system permease protein.
       0.630
SIT29248.1
Gliding motility-associated C-terminal domain-containing protein.
  
    0.564
SIS80153.1
Transcriptional regulator, MarR family.
       0.554
SIT04897.1
Hypothetical protein.
  
     0.495
SIT17261.1
Hypothetical protein.
  
     0.491
SIS58992.1
Transglutaminase-like superfamily protein.
  
     0.481
SIS78107.1
Chromate transporter.
  
     0.475
SIS66927.1
Hypothetical protein.
  
     0.466
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.