Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS61501.1 | SIS61515.1 | SAMN05421788_101228 | SAMN05421788_101229 | Hypothetical protein. | DNA-binding transcriptional regulator, PadR family. | 0.946 |
SIS61501.1 | SIS61532.1 | SAMN05421788_101228 | SAMN05421788_101230 | Hypothetical protein. | Putative ATPase. | 0.562 |
SIS61501.1 | SIS61545.1 | SAMN05421788_101228 | SAMN05421788_101231 | Hypothetical protein. | Acetyl esterase/lipase. | 0.485 |
SIS61501.1 | SIS61559.1 | SAMN05421788_101228 | SAMN05421788_101232 | Hypothetical protein. | ElaA protein. | 0.485 |
SIS61515.1 | SIS61501.1 | SAMN05421788_101229 | SAMN05421788_101228 | DNA-binding transcriptional regulator, PadR family. | Hypothetical protein. | 0.946 |
SIS61515.1 | SIS61532.1 | SAMN05421788_101229 | SAMN05421788_101230 | DNA-binding transcriptional regulator, PadR family. | Putative ATPase. | 0.592 |
SIS61515.1 | SIS61545.1 | SAMN05421788_101229 | SAMN05421788_101231 | DNA-binding transcriptional regulator, PadR family. | Acetyl esterase/lipase. | 0.487 |
SIS61515.1 | SIS61559.1 | SAMN05421788_101229 | SAMN05421788_101232 | DNA-binding transcriptional regulator, PadR family. | ElaA protein. | 0.485 |
SIS61532.1 | SIS61501.1 | SAMN05421788_101230 | SAMN05421788_101228 | Putative ATPase. | Hypothetical protein. | 0.562 |
SIS61532.1 | SIS61515.1 | SAMN05421788_101230 | SAMN05421788_101229 | Putative ATPase. | DNA-binding transcriptional regulator, PadR family. | 0.592 |
SIS61532.1 | SIS61545.1 | SAMN05421788_101230 | SAMN05421788_101231 | Putative ATPase. | Acetyl esterase/lipase. | 0.658 |
SIS61532.1 | SIS61559.1 | SAMN05421788_101230 | SAMN05421788_101232 | Putative ATPase. | ElaA protein. | 0.691 |
SIS61545.1 | SIS61501.1 | SAMN05421788_101231 | SAMN05421788_101228 | Acetyl esterase/lipase. | Hypothetical protein. | 0.485 |
SIS61545.1 | SIS61515.1 | SAMN05421788_101231 | SAMN05421788_101229 | Acetyl esterase/lipase. | DNA-binding transcriptional regulator, PadR family. | 0.487 |
SIS61545.1 | SIS61532.1 | SAMN05421788_101231 | SAMN05421788_101230 | Acetyl esterase/lipase. | Putative ATPase. | 0.658 |
SIS61545.1 | SIS61559.1 | SAMN05421788_101231 | SAMN05421788_101232 | Acetyl esterase/lipase. | ElaA protein. | 0.777 |
SIS61559.1 | SIS61501.1 | SAMN05421788_101232 | SAMN05421788_101228 | ElaA protein. | Hypothetical protein. | 0.485 |
SIS61559.1 | SIS61515.1 | SAMN05421788_101232 | SAMN05421788_101229 | ElaA protein. | DNA-binding transcriptional regulator, PadR family. | 0.485 |
SIS61559.1 | SIS61532.1 | SAMN05421788_101232 | SAMN05421788_101230 | ElaA protein. | Putative ATPase. | 0.691 |
SIS61559.1 | SIS61545.1 | SAMN05421788_101232 | SAMN05421788_101231 | ElaA protein. | Acetyl esterase/lipase. | 0.777 |
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