STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS63074.1L-lactate dehydrogenase complex protein LldG. (197 aa)    
Predicted Functional Partners:
SIS63096.1
L-lactate dehydrogenase complex protein LldF.
 
 
 0.985
SIS63115.1
L-lactate dehydrogenase complex protein LldE.
 
 
 0.977
SIS71145.1
L-lactate dehydrogenase complex protein LldF.
 
 
 0.935
SIT09090.1
L-lactate dehydrogenase complex protein LldE.
 
 
 0.889
SIS63130.1
Sugar (pentulose or hexulose) kinase.
 
     0.825
SIS63139.1
L-rhamnose isomerase / sugar isomerase.
       0.597
SIT30056.1
Cysteine-rich domain-containing protein.
  
 
 0.568
SIT30060.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.568
SIS63155.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
       0.551
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.520
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.