STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS73290.1stearoyl-CoA desaturase (delta-9 desaturase). (241 aa)    
Predicted Functional Partners:
SIT16156.1
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.
   
 0.907
SIS97204.1
stearoyl-CoA desaturase (delta-9 desaturase).
  
  
 
0.904
SIS73252.1
Steroid 5-alpha reductase family enzyme.
       0.784
SIS73272.1
Protein of unknown function.
       0.773
SIS73229.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.691
SIS73173.1
Hypothetical protein.
       0.639
SIS73192.1
Predicted NAD/FAD-binding protein.
       0.639
SIS73212.1
Acetyl esterase/lipase.
       0.626
SIS73157.1
Cyclopropane-fatty-acyl-phospholipid synthase.
       0.562
SIT21798.1
DnaJ domain-containing protein.
  
 
   0.528
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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