STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS75092.1Response regulator receiver domain-containing protein. (131 aa)    
Predicted Functional Partners:
SIS75107.1
PAS domain S-box-containing protein.
 
 
 
 0.931
SIT06346.1
PAS domain-containing protein.
  
 
 
 0.744
SIT30344.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 
 
 0.714
SIS94459.1
PAS domain S-box-containing protein.
   
 
 0.625
SIT26658.1
Hypothetical protein.
 
     0.619
SIT33471.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 
 
 0.611
SIS74503.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
  
 0.609
SIS98459.1
PAS domain S-box-containing protein.
   
 
 0.592
SIT25721.1
Hypothetical protein.
 
 
 
 0.590
SIT33963.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 
 0.563
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.