STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS95468.1Fructokinase. (291 aa)    
Predicted Functional Partners:
SIT02984.1
Alpha-glucosidase.
 
  
 0.929
SIS61750.1
Glucosamine-6-phosphate deaminase.
  
 
 0.916
SIS59008.1
Glucosamine-6-phosphate deaminase.
  
 
 0.916
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.915
SIS98651.1
6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.913
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
 
 0.912
SIT31779.1
Mannose-6-phosphate isomerase, type 1.
    
 0.911
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
    
 0.910
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.906
SIS62700.1
Alpha-glucosidase, glycosyl hydrolase family GH31; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.904
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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