STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS96108.1Isoquinoline 1-oxidoreductase, beta subunit. (721 aa)    
Predicted Functional Partners:
SIS96091.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 0.998
SIS96074.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 0.965
SIS96055.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 
 
 0.918
SIS96018.1
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family.
 
  
 0.826
SIS96125.1
Hypothetical protein.
 
    0.806
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.