STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS99535.1Alpha-galactosidase. (678 aa)    
Predicted Functional Partners:
SIT17192.1
Alpha galactosidase A.
  
  
 
0.928
SIS73910.1
Alpha-galactosidase.
 
  
0.916
SIT07009.1
Alpha-galactosidase.
   
 0.901
SIT07018.1
Alpha-galactosidase.
    
 0.901
SIS68866.1
Aldose 1-epimerase.
   
 
  0.900
SIS92368.1
Arylsulfatase.
    
  0.900
SIT24499.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
   
 
  0.900
SIT27832.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
   
 
  0.900
SIS99506.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
  
 0.831
SIT34439.1
Beta-galactosidase.
 
  
  0.823
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.