STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT05042.1Signal transduction histidine kinase. (348 aa)    
Predicted Functional Partners:
SIT24578.1
Hypothetical protein.
 
 
0.890
SIS71836.1
Response regulator receiver domain-containing protein.
  
   0.832
SIT06292.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
  
   0.831
SIS69805.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
  
   0.828
SIT17878.1
Response regulator receiver domain-containing protein.
  
   0.828
SIS76004.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
   0.826
SIS83499.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
  
   0.822
SIT24583.1
Response regulator receiver domain-containing protein.
  
   0.817
SIS82212.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
   0.815
SIT18635.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
   0.811
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.