Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS98909.1 | SIT05104.1 | SAMN05421788_102519 | SAMN05421788_103158 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.639 |
SIS98909.1 | SIT05115.1 | SAMN05421788_102519 | SAMN05421788_103159 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.595 |
SIS98909.1 | SIT27808.1 | SAMN05421788_102519 | SAMN05421788_107323 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.410 |
SIT05104.1 | SIS98909.1 | SAMN05421788_103158 | SAMN05421788_102519 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.639 |
SIT05104.1 | SIT05115.1 | SAMN05421788_103158 | SAMN05421788_103159 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.798 |
SIT05104.1 | SIT05264.1 | SAMN05421788_103158 | SAMN05421788_103170 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.654 |
SIT05104.1 | SIT06604.1 | SAMN05421788_103158 | SAMN05421788_103266 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.749 |
SIT05104.1 | SIT27808.1 | SAMN05421788_103158 | SAMN05421788_107323 | FecR family protein. | FecR family protein. | 0.752 |
SIT05104.1 | SIT28905.1 | SAMN05421788_103158 | SAMN05421788_108166 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.669 |
SIT05104.1 | SIT29032.1 | SAMN05421788_103158 | SAMN05421788_108200 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.769 |
SIT05104.1 | SIT30004.1 | SAMN05421788_103158 | SAMN05421788_109103 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.671 |
SIT05104.1 | SIT34189.1 | SAMN05421788_103158 | SAMN05421788_11533 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.775 |
SIT05104.1 | SIT34417.1 | SAMN05421788_103158 | SAMN05421788_11647 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.742 |
SIT05115.1 | SIS98909.1 | SAMN05421788_103159 | SAMN05421788_102519 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.595 |
SIT05115.1 | SIT05104.1 | SAMN05421788_103159 | SAMN05421788_103158 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.798 |
SIT05115.1 | SIT05264.1 | SAMN05421788_103159 | SAMN05421788_103170 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.421 |
SIT05115.1 | SIT29032.1 | SAMN05421788_103159 | SAMN05421788_108200 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.494 |
SIT05264.1 | SIT05104.1 | SAMN05421788_103170 | SAMN05421788_103158 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.654 |
SIT05264.1 | SIT05115.1 | SAMN05421788_103170 | SAMN05421788_103159 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.421 |
SIT06604.1 | SIT05104.1 | SAMN05421788_103266 | SAMN05421788_103158 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.749 |
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