Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS93249.1 | SIT24939.1 | SAMN05421788_102170 | SAMN05421788_106214 | Protein of unknown function. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.509 |
SIS98311.1 | SIS98325.1 | SAMN05421788_102478 | SAMN05421788_102479 | Glycosyltransferase involved in cell wall bisynthesis. | O-antigen ligase. | 0.952 |
SIS98311.1 | SIT24939.1 | SAMN05421788_102478 | SAMN05421788_106214 | Glycosyltransferase involved in cell wall bisynthesis. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.429 |
SIS98325.1 | SIS98311.1 | SAMN05421788_102479 | SAMN05421788_102478 | O-antigen ligase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.952 |
SIS98325.1 | SIT24939.1 | SAMN05421788_102479 | SAMN05421788_106214 | O-antigen ligase. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.468 |
SIS98879.1 | SIT24939.1 | SAMN05421788_102517 | SAMN05421788_106214 | Quinol monooxygenase YgiN. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.431 |
SIT21335.1 | SIT24939.1 | SAMN05421788_105135 | SAMN05421788_106214 | TonB-dependent receptor. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.469 |
SIT24933.1 | SIT24939.1 | SAMN05421788_106213 | SAMN05421788_106214 | Hypothetical protein. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.598 |
SIT24939.1 | SIS93249.1 | SAMN05421788_106214 | SAMN05421788_102170 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Protein of unknown function. | 0.509 |
SIT24939.1 | SIS98311.1 | SAMN05421788_106214 | SAMN05421788_102478 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Glycosyltransferase involved in cell wall bisynthesis. | 0.429 |
SIT24939.1 | SIS98325.1 | SAMN05421788_106214 | SAMN05421788_102479 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | O-antigen ligase. | 0.468 |
SIT24939.1 | SIS98879.1 | SAMN05421788_106214 | SAMN05421788_102517 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Quinol monooxygenase YgiN. | 0.431 |
SIT24939.1 | SIT21335.1 | SAMN05421788_106214 | SAMN05421788_105135 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | TonB-dependent receptor. | 0.469 |
SIT24939.1 | SIT24933.1 | SAMN05421788_106214 | SAMN05421788_106213 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Hypothetical protein. | 0.598 |
SIT24939.1 | SIT27233.1 | SAMN05421788_106214 | SAMN05421788_107179 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | TonB-dependent receptor. | 0.454 |
SIT27233.1 | SIT24939.1 | SAMN05421788_107179 | SAMN05421788_106214 | TonB-dependent receptor. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.454 |