STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT29368.1Nitroreductase. (232 aa)    
Predicted Functional Partners:
SIS90417.1
N-ethylmaleimide reductase.
  
 
 0.903
SIT16068.1
N-ethylmaleimide reductase.
  
 
 0.903
SIT31212.1
2,4-dienoyl-CoA reductase.
  
 
 0.903
SIT31216.1
N-ethylmaleimide reductase.
  
 
 0.903
SIT13715.1
Nitroreductase.
  
  
 
0.902
SIT29372.1
Transcriptional regulator, HxlR family.
       0.546
SIT28530.1
ABC-2 type transport system permease protein.
  
  
 0.515
SIT34510.1
Siderophore biosynthesis non-ribosomal peptide synthetase modules; Surfactin family lipopeptide synthetase A/fengycin family lipopeptide synthetase B/lichenysin synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.422
SIT23747.1
Tyrocidine synthetase-2.
   
 
 0.401
SIT34843.1
Tyrocidine synthetase-3.
   
 
 0.401
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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