STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT34506.1Amino acid adenylation domain-containing protein. (3177 aa)    
Predicted Functional Partners:
SIT22141.1
Amino acid adenylation domain-containing protein.
 
 
0.939
SIT34806.1
Gramicidin S synthase 2/tyrocidine synthetase-3.
 
 
0.929
SIT22134.1
Amino acid adenylation domain-containing protein.
 
 
0.871
SIT15352.1
Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.
 
 0.868
SIT23792.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 
 0.832
SIT34510.1
Siderophore biosynthesis non-ribosomal peptide synthetase modules; Surfactin family lipopeptide synthetase A/fengycin family lipopeptide synthetase B/lichenysin synthetase A; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.828
SIT22113.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 
 0.823
SIT23786.1
Surfactin synthase thioesterase subunit.
 
  
 0.818
SIT15361.1
Acyl transferase domain-containing protein.
 
 0.800
SIT34507.1
Ornithine cyclodeaminase.
 
   
 0.779
Your Current Organism:
Filimonas lacunae
NCBI taxonomy Id: 477680
Other names: Bacteroidetes bacterium YT0021, DSM 21054, F. lacunae, Filimonas lacunae Shiratori et al. 2009 emend. Leandro et al. 2013, NBRC 104114, strain YT0021, strain YT21
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