STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT38550.1Deoxyadenosine/deoxycytidine kinase. (204 aa)    
Predicted Functional Partners:
SFT41148.1
4Fe-4S dicluster domain-containing protein.
   
 0.968
cmk
Cytidylate kinase.
   
 
  0.967
SFT81815.1
dCMP deaminase.
   
 0.944
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
 
 0.942
SFT39624.1
Hypothetical protein.
   
 0.910
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.910
SFT89327.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase/dihydroneopte rin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
      0.896
SFT40268.1
NAD(P)H dehydrogenase (quinone).
  
  0.889
SFT41940.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
  0.868
SFT80289.1
NAD(P)H-binding.
   
  0.868
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.