STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT39205.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (336 aa)    
Predicted Functional Partners:
SFT39220.1
Iron complex transport system ATP-binding protein.
 0.999
SFT39189.1
Iron complex transport system substrate-binding protein.
 
 
 0.992
SFT55527.1
Iron complex transport system ATP-binding protein.
 0.992
SFT44866.1
Iron complex transport system ATP-binding protein/vitamin B12 transport system ATP-binding protein.
 
 0.978
SFT44908.1
Iron complex transport system substrate-binding protein.
 
 
 0.965
SFT41200.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
 
 0.958
SFT55498.1
Iron complex transport system substrate-binding protein.
 
 0.952
SFT35917.1
GxxExxY protein.
  
 0.916
SFT39171.1
Iron complex outermembrane recepter protein.
 
    0.740
SFT44844.1
Putative hemin transport protein.
 
  
 0.626
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.