STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT41326.1Antitoxin component YwqK of the YwqJK toxin-antitoxin module. (371 aa)    
Predicted Functional Partners:
SFT41289.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
       0.773
SFT41308.1
acyl-CoA thioester hydrolase.
       0.773
SFT81329.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.772
SFT35349.1
Hypothetical protein.
  
     0.715
SFT45238.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.708
SFT67463.1
MORN repeat variant.
  
     0.618
SFT80980.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.508
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
       0.504
SFT35411.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.499
SFT75728.1
Putative aminopeptidase FrvX.
  
     0.488
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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