STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT41940.1Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. (472 aa)    
Predicted Functional Partners:
SFT41148.1
4Fe-4S dicluster domain-containing protein.
   
 0.968
SFT47914.1
Tellurite resistance protein TerB.
   
 
 0.958
SFT39624.1
Hypothetical protein.
   
 0.877
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.877
SFT38550.1
Deoxyadenosine/deoxycytidine kinase.
   
  0.868
SFT89327.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase/dihydroneopte rin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
   
  0.868
SFT48854.1
Hypothetical protein.
   
   0.814
SFT81972.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
   0.785
SFT42933.1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).
    
   0.772
SFT80809.1
Hypothetical protein.
 
    0.743
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.