STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT44494.1Por secretion system C-terminal sorting domain-containing protein. (475 aa)    
Predicted Functional Partners:
SFT74343.1
Hypothetical protein.
    
 
 0.630
SFT79299.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.525
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.519
SFT53440.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.518
SFT76365.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.516
SFT44474.1
Por secretion system C-terminal sorting domain-containing protein.
 
    
0.508
SFT88242.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.489
SFT90823.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.486
SFT39728.1
Hypothetical protein.
  
     0.459
SFT69477.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.446
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
Server load: low (24%) [HD]