STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT45216.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
SFT88562.1
Peptidase family C25.
  
     0.765
SFT39026.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.756
SFT49062.1
Hypothetical protein.
  
     0.745
SFT88551.1
Peptidase family C25.
  
     0.736
SFT88242.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.731
SFT63290.1
Hypothetical protein.
  
     0.717
SFT39009.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.698
SFT45238.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
       0.649
SFT68640.1
Hypothetical protein.
  
     0.647
SFT45251.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase/D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase; Belongs to the gmhB family.
       0.645
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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