STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT47505.1Delta-60 repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein. (640 aa)    
Predicted Functional Partners:
SFT82134.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
   0.622
SFT35411.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.583
SFT87621.1
Lysophospholipase L1.
  
 
  0.574
SFT73265.1
Conserved repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
     0.525
SFT55408.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.511
SFT51727.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.506
SFT48767.1
WD40-like Beta Propeller Repeat.
 
  0.503
SFT89654.1
C-terminal processing peptidase-1. Serine peptidase. MEROPS family S41A.
  
   0.497
SFT43534.1
Hypothetical protein.
    
   0.493
SFT35441.1
Peptidase family S41.
  
   0.471
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.