STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT48514.1Serine O-acetyltransferase. (249 aa)    
Predicted Functional Partners:
SFT48527.1
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.994
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.982
SFT41183.1
Cystathionine beta-synthase.
 
 0.946
SFT66511.1
Glycosyltransferase, GT2 family.
  
 
 0.879
SFT48432.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.856
SFT48449.1
uroporphyrin-III C-methyltransferase.
       0.796
SFT48419.1
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.783
SFT48464.1
Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
       0.782
SFT35254.1
Serine O-acetyltransferase.
  
  
  0.781
SFT48483.1
Thioredoxin reductase (NADPH).
  
    0.774
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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