Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFT43044.1 | SFT43836.1 | SAMN05216474_0522 | SAMN05216474_0569 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate dehydrogenase. | 0.752 |
SFT43044.1 | SFT48686.1 | SAMN05216474_0522 | SAMN05216474_0835 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Anthranilate synthase, component II. | 0.536 |
SFT43044.1 | SFT52645.1 | SAMN05216474_0522 | SAMN05216474_1088 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.693 |
SFT43044.1 | SFT68771.1 | SAMN05216474_0522 | SAMN05216474_1813 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.489 |
SFT43044.1 | SFT73551.1 | SAMN05216474_0522 | SAMN05216474_2027 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.995 |
SFT43044.1 | SFT77166.1 | SAMN05216474_0522 | SAMN05216474_2311 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Para-aminobenzoate synthetase component 1. | 0.532 |
SFT43044.1 | aroC | SAMN05216474_0522 | SAMN05216474_1228 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.698 |
SFT43044.1 | aroK | SAMN05216474_0522 | SAMN05216474_0973 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.676 |
SFT43836.1 | SFT43044.1 | SAMN05216474_0569 | SAMN05216474_0522 | Shikimate dehydrogenase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.752 |
SFT43836.1 | SFT48686.1 | SAMN05216474_0569 | SAMN05216474_0835 | Shikimate dehydrogenase. | Anthranilate synthase, component II. | 0.903 |
SFT43836.1 | SFT52645.1 | SAMN05216474_0569 | SAMN05216474_1088 | Shikimate dehydrogenase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.949 |
SFT43836.1 | SFT68771.1 | SAMN05216474_0569 | SAMN05216474_1813 | Shikimate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.995 |
SFT43836.1 | SFT73551.1 | SAMN05216474_0569 | SAMN05216474_2027 | Shikimate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.991 |
SFT43836.1 | SFT77166.1 | SAMN05216474_0569 | SAMN05216474_2311 | Shikimate dehydrogenase. | Para-aminobenzoate synthetase component 1. | 0.880 |
SFT43836.1 | aroC | SAMN05216474_0569 | SAMN05216474_1228 | Shikimate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.973 |
SFT43836.1 | aroK | SAMN05216474_0569 | SAMN05216474_0973 | Shikimate dehydrogenase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.998 |
SFT43836.1 | aroQ | SAMN05216474_0569 | SAMN05216474_2053 | Shikimate dehydrogenase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.994 |
SFT48686.1 | SFT43044.1 | SAMN05216474_0835 | SAMN05216474_0522 | Anthranilate synthase, component II. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.536 |
SFT48686.1 | SFT43836.1 | SAMN05216474_0835 | SAMN05216474_0569 | Anthranilate synthase, component II. | Shikimate dehydrogenase. | 0.903 |
SFT48686.1 | SFT52645.1 | SAMN05216474_0835 | SAMN05216474_1088 | Anthranilate synthase, component II. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.904 |
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