STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT51240.1Histidine kinase. (973 aa)    
Predicted Functional Partners:
SFT51270.1
Two component transcriptional regulator, LytTR family.
 
  0.963
SFT36025.1
Two component transcriptional regulator, LytTR family.
  
  0.891
SFT65482.1
Two component transcriptional regulator, LytTR family.
  
  0.891
SFT79735.1
Two component transcriptional regulator, LytTR family.
  
  0.891
SFT85832.1
Two component transcriptional regulator, LytTR family.
  
  0.891
SFT50295.1
Two component transcriptional regulator, LytTR family.
  
  0.890
SFT67266.1
Two component transcriptional regulator, LytTR family.
  
  0.886
SFT82122.1
Two component transcriptional regulator, LytTR family.
  
  0.865
SFT51227.1
Two component regulator propeller.
 
    
0.822
SFT51256.1
Histidine kinase.
 
    
0.733
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.