STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT51536.1Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (709 aa)    
Predicted Functional Partners:
SFT51547.1
Peptidase family M28.
 
    0.858
SFT73265.1
Conserved repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
     0.602
SFT37016.1
Conserved repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
     0.554
SFT51523.1
Hypothetical protein.
       0.546
SFT89379.1
Dipeptidyl-peptidase-4.
  
     0.504
SFT91035.1
Conserved repeat domain-containing protein/delta-60 repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
     0.489
SFT34732.1
Do/DeqQ family serine protease.
   
 
 0.452
SFT35814.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.428
SFT86298.1
Protein of unknown function.
  
     0.425
SFT35721.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.415
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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