STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT53641.1Electron transfer flavoprotein beta subunit. (246 aa)    
Predicted Functional Partners:
SFT53630.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.999
SFT75825.1
Acyl-CoA dehydrogenase.
 
 
 0.969
SFT88110.1
Acyl-CoA dehydrogenase.
 
 
 0.968
SFT89770.1
Acyl-CoA dehydrogenase.
 
 
 0.967
SFT64151.1
glutaryl-CoA dehydrogenase.
 
 
 0.949
SFT37229.1
Geranylgeranyl reductase family.
  
 
 0.910
SFT37408.1
Glycolate oxidase.
 
 
 0.890
SFT41148.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.875
SFT89162.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.869
SFT82061.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
   
 
  0.856
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.