STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT63020.1Glycosyltransferase involved in cell wall bisynthesis. (409 aa)    
Predicted Functional Partners:
SFT70397.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
    0.888
SFT63064.1
Aminotransferase, LLPSF_NHT_00031 family; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.787
SFT63048.1
Putative hydrolase of the HAD superfamily.
    
  0.781
SFT63036.1
Carbamoyl-phosphate synthase large subunit.
       0.773
SFT63094.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
    0.700
SFT63079.1
Polysaccharide biosynthesis protein.
 
    0.696
SFT63004.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.635
SFT46910.1
Hypothetical protein.
    
   0.583
SFT75314.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.499
SFT62779.1
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.496
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.