STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT64199.1Hypothetical protein; Manually curated. (268 aa)    
Predicted Functional Partners:
SFT51575.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 0.694
SFT46730.1
PAS domain S-box-containing protein.
   
 0.608
SFT89044.1
Signal transduction histidine kinase.
   
 0.608
SFT42924.1
GAF sensor signal transduction histidine kinase.
    
 0.498
SFT64216.1
Penicillin-binding protein 1A.
       0.498
SFT64229.1
3-oxoacid CoA-transferase subunit A.
       0.498
SFT91565.1
Transcriptional regulator.
    
 0.496
SFT83573.1
PAS domain S-box-containing protein.
   
 0.483
SFT46132.1
PAS domain S-box-containing protein.
   
 0.472
SFT64182.1
uroporphyrinogen-III synthase.
       0.458
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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