STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT68139.1Acyl-protein synthetase, LuxE. (325 aa)    
Predicted Functional Partners:
SFT41166.1
Acyl-CoA reductase (LuxC).
  
 
  0.901
SFT51941.1
NUDIX domain-containing protein.
  
     0.758
SFT90063.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
   
 0.739
queE
Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
     0.682
SFT68150.1
Hypothetical protein.
       0.678
SFT73365.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
 
  0.642
SFT89301.1
Hypothetical protein.
  
     0.626
SFT34526.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.592
SFT65185.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
    
  0.592
SFT82429.1
Aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.592
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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