Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFT50145.1 | SFT50979.1 | SAMN05216474_0915 | SAMN05216474_0972 | Dihydroorotase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.937 |
SFT50145.1 | SFT51198.1 | SAMN05216474_0915 | SAMN05216474_0988 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit. | 0.944 |
SFT50145.1 | SFT68355.1 | SAMN05216474_0915 | SAMN05216474_1782 | Dihydroorotase. | Dihydroorotase. | 0.952 |
SFT50145.1 | SFT88191.1 | SAMN05216474_0915 | SAMN05216474_2893 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase. | 0.748 |
SFT50145.1 | carA | SAMN05216474_0915 | SAMN05216474_1961 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.974 |
SFT50145.1 | pyrB | SAMN05216474_0915 | SAMN05216474_2076 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SFT50145.1 | pyrD | SAMN05216474_0915 | SAMN05216474_3106 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.986 |
SFT50145.1 | pyrE | SAMN05216474_0915 | SAMN05216474_1041 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.832 |
SFT50145.1 | pyrR | SAMN05216474_0915 | SAMN05216474_2075 | Dihydroorotase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.949 |
SFT50979.1 | SFT50145.1 | SAMN05216474_0972 | SAMN05216474_0915 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotase. | 0.937 |
SFT50979.1 | SFT51198.1 | SAMN05216474_0972 | SAMN05216474_0988 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase large subunit. | 0.651 |
SFT50979.1 | SFT68355.1 | SAMN05216474_0972 | SAMN05216474_1782 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotase. | 0.827 |
SFT50979.1 | SFT88191.1 | SAMN05216474_0972 | SAMN05216474_2893 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Orotidine-5'-phosphate decarboxylase. | 0.981 |
SFT50979.1 | carA | SAMN05216474_0972 | SAMN05216474_1961 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.705 |
SFT50979.1 | pyrB | SAMN05216474_0972 | SAMN05216474_2076 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.966 |
SFT50979.1 | pyrD | SAMN05216474_0972 | SAMN05216474_3106 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.718 |
SFT50979.1 | pyrE | SAMN05216474_0972 | SAMN05216474_1041 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.822 |
SFT50979.1 | pyrR | SAMN05216474_0972 | SAMN05216474_2075 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.950 |
SFT51198.1 | SFT50145.1 | SAMN05216474_0988 | SAMN05216474_0915 | Carbamoyl-phosphate synthase large subunit. | Dihydroorotase. | 0.944 |
SFT51198.1 | SFT50979.1 | SAMN05216474_0988 | SAMN05216474_0972 | Carbamoyl-phosphate synthase large subunit. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.651 |
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