STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT69768.1Predicted dithiol-disulfide isomerase, DsbA family. (335 aa)    
Predicted Functional Partners:
SFT63715.1
Arsenate reductase, glutaredoxin family; Belongs to the ArsC family.
   
   0.841
SFT67291.1
Arsenate reductase; Belongs to the ArsC family.
   
   0.841
SFT69791.1
Transcriptional regulator, HxlR family.
 
     0.633
SFT85429.1
Hypothetical protein.
  
     0.619
SFT41711.1
Hypothetical protein.
  
 
 0.572
SFT76376.1
Peptidase family C25.
    
   0.478
SFT88551.1
Peptidase family C25.
    
   0.478
SFT88562.1
Peptidase family C25.
    
   0.478
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
   0.457
SFT38613.1
Hypothetical protein; Belongs to the pirin family.
 
    0.413
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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