SFT72941.1 protein (Lishizhenia tianjinensis)

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Score

SFT72941.1

Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. (337 aa)

Predicted Functional Partners:

SFT76045.1

0.635

SFT56636.1

0.626

rpoA

0.626

rpoC

0.626

rpoB

0.626

SFT34716.1

0.546

SFT75808.1

0.546

SFT72921.1

0.545

SFT72932.1

0.545

SFT52247.1

0.512

Your Current Organism:

Lishizhenia tianjinensis

NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFT34716.1	SFT56636.1	SAMN05216474_0018	SAMN05216474_1363	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase Rpb6.	0.901
SFT34716.1	SFT72941.1	SAMN05216474_0018	SAMN05216474_1973	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.546
SFT34716.1	SFT76045.1	SAMN05216474_0018	SAMN05216474_2225	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA polymerase III, alpha subunit.	0.527
SFT34716.1	rpoA	SAMN05216474_0018	SAMN05216474_1959	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.925
SFT34716.1	rpoB	SAMN05216474_0018	SAMN05216474_2869	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.913
SFT34716.1	rpoC	SAMN05216474_0018	SAMN05216474_2868	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
SFT52247.1	SFT72941.1	SAMN05216474_1062	SAMN05216474_1973	Hypothetical protein.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.512
SFT56636.1	SFT34716.1	SAMN05216474_1363	SAMN05216474_0018	RNA polymerase Rpb6.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.901
SFT56636.1	SFT72941.1	SAMN05216474_1363	SAMN05216474_1973	RNA polymerase Rpb6.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.626
SFT56636.1	SFT75808.1	SAMN05216474_1363	SAMN05216474_2206	RNA polymerase Rpb6.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.901
SFT56636.1	SFT76045.1	SAMN05216474_1363	SAMN05216474_2225	RNA polymerase Rpb6.	DNA polymerase III, alpha subunit.	0.412
SFT56636.1	rpoA	SAMN05216474_1363	SAMN05216474_1959	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SFT56636.1	rpoB	SAMN05216474_1363	SAMN05216474_2869	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SFT56636.1	rpoC	SAMN05216474_1363	SAMN05216474_2868	RNA polymerase Rpb6.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SFT72921.1	SFT72932.1	SAMN05216474_1971	SAMN05216474_1972	3-hydroxybutyryl-CoA dehydrogenase.	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.994
SFT72921.1	SFT72941.1	SAMN05216474_1971	SAMN05216474_1973	3-hydroxybutyryl-CoA dehydrogenase.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.545
SFT72932.1	SFT72921.1	SAMN05216474_1972	SAMN05216474_1971	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	3-hydroxybutyryl-CoA dehydrogenase.	0.994
SFT72932.1	SFT72941.1	SAMN05216474_1972	SAMN05216474_1973	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.545
SFT72941.1	SFT34716.1	SAMN05216474_1973	SAMN05216474_0018	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.546
SFT72941.1	SFT52247.1	SAMN05216474_1973	SAMN05216474_1062	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	Hypothetical protein.	0.512