STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT73081.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. (357 aa)    
Predicted Functional Partners:
SFT90063.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 
 0.975
SFT73044.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 0.959
SFT43884.1
Cytochrome P450.
  
 0.954
SFT73032.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 0.937
SFT48432.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.936
SFT73053.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 0.923
SFT73021.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 0.919
SFT73067.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
  
0.900
SFT41148.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.885
SFT41870.1
Sulfide:quinone oxidoreductase.
 
 
 0.872
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.