STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT74419.1Iron complex outermembrane recepter protein. (743 aa)    
Predicted Functional Partners:
SFT74404.1
Hypothetical protein.
       0.773
SFT74428.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
       0.561
SFT74356.1
hydroxymethylglutaryl-CoA reductase.
       0.518
SFT74375.1
Lipid kinase, YegS/Rv2252/BmrU family.
       0.518
SFT74390.1
Phosphoglycerol transferase MdoB.
       0.518
SFT80204.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.516
SFT82287.1
Carboxypeptidase regulatory-like domain-containing protein.
  
    0.494
SFT69899.1
TonB family C-terminal domain-containing protein.
  
   0.477
SFT82275.1
Hypothetical protein.
  
     0.444
SFT70812.1
Hypothetical protein.
  
 
   0.430
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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