STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT74476.1Thiopurine S-methyltransferase (TPMT). (193 aa)    
Predicted Functional Partners:
SFT43884.1
Cytochrome P450.
    
 0.775
SFT85716.1
methylmalonyl-CoA epimerase.
 
      0.659
SFT74489.1
Transcriptional regulator, ArsR family.
     
 0.544
SFT65283.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.533
SFT74467.1
His Kinase A (phospho-acceptor) domain-containing protein.
       0.516
SFT74511.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
   
 0.510
SFT84554.1
Glycine dehydrogenase.
     
 0.489
SFT84568.1
Glycine dehydrogenase.
     
 0.489
speE
Spermidine synthase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the spermidine/spermine synthase family.
     
 0.473
SFT51471.1
Methyltransferase domain-containing protein.
  
 
  0.465
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.