STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT75314.1Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. (463 aa)    
Predicted Functional Partners:
SFT63133.1
Capsular exopolysaccharide family.
 
 
 0.999
SFT88304.1
Capsular exopolysaccharide family.
 
 
 0.999
SFT66511.1
Glycosyltransferase, GT2 family.
 
 0.997
SFT63118.1
Polysaccharide export outer membrane protein.
 
 
 0.934
SFT88294.1
Polysaccharide export outer membrane protein.
  
 
 0.924
SFT67789.1
Mannose-1-phosphate guanylyltransferase (GDP).
  
 
 0.898
SFT48731.1
Glycosyltransferase, GT2 family.
 
 0.880
SFT85587.1
O-Antigen ligase.
 
  
 0.841
SFT88526.1
O-antigen ligase.
 
  
 0.838
SFT88539.1
LPS O-antigen chain length determinant protein, WzzB/FepE family.
 
 
 0.830
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.