STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT81388.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
SFT81374.1
Hypothetical protein.
       0.773
SFT40775.1
Thioredoxin.
   
   0.745
SFT66256.1
AhpC/TSA family protein.
   
   0.745
SFT85556.1
Thioredoxin.
   
   0.745
SFT41711.1
Hypothetical protein.
  
 
 0.739
msrB
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
    
 
 0.648
SFT76925.1
Peptide-methionine (R)-S-oxide reductase.
    
 
 0.648
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.647
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.647
SFT81356.1
Hypothetical protein.
       0.503
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.