STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT81904.1Hypothetical protein. (564 aa)    
Predicted Functional Partners:
SFT81891.1
Thiol-disulfide isomerase or thioredoxin.
 
     0.925
SFT81878.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.836
SFT55420.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.769
SFT81920.1
Outer membrane protein Omp28.
       0.748
SFT88539.1
LPS O-antigen chain length determinant protein, WzzB/FepE family.
  
     0.708
SFT45115.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.701
SFT55408.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.700
SFT65324.1
Hypothetical protein.
  
     0.678
SFT48564.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.669
SFT81864.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.655
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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