STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT82266.1Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. (240 aa)    
Predicted Functional Partners:
SFT89044.1
Signal transduction histidine kinase.
 
 0.976
SFT83573.1
PAS domain S-box-containing protein.
 0.972
SFT68117.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 0.968
SFT46730.1
PAS domain S-box-containing protein.
 
 0.949
SFT89537.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
  0.940
SFT67363.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
  0.938
SFT79155.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  0.912
SFT39699.1
Signal transduction histidine kinase.
  
  0.900
SFT51109.1
Signal transduction histidine kinase.
  
 
  0.879
SFT42924.1
GAF sensor signal transduction histidine kinase.
 
 0.866
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.