STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT83627.1Cytochrome oxidase maturation protein, cbb3-type. (64 aa)    
Predicted Functional Partners:
SFT83643.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.984
SFT83707.1
FixH protein.
 
  
 0.948
SFT83681.1
Cytochrome c oxidase cbb3-type subunit 3.
 
 
 0.946
SFT83694.1
Cytochrome c oxidase accessory protein FixG.
 
  
 0.943
SFT83716.1
Hypothetical protein.
 
     0.907
SFT83612.1
Cu+-exporting ATPase.
 
  
 0.876
SFT83658.1
Cbb3-type cytochrome oxidase component FixQ.
 
 
 0.857
SFT83741.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.852
SFT83726.1
4Fe-4S single cluster domain-containing protein.
       0.773
SFT83598.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
    0.561
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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