STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT84842.1Gliding motility-associated C-terminal domain-containing protein. (414 aa)    
Predicted Functional Partners:
SFT84856.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.945
SFT79704.1
Tetratricopeptide repeat-containing protein.
  
     0.772
SFT91597.1
Type IX secretion system membrane protein, PorP/SprF family; Partial gene; manually curated.
  
     0.770
SFT76480.1
Probable protein-translocating porin PorT.
  
     0.769
SFT76352.1
Gliding motility-associated lipoprotein GldJ/gliding motility-associated lipoprotein GldJ,TIGR03530.
  
     0.766
SFT80305.1
Sulfatase-modifying factor enzyme 1.
  
     0.762
SFT74061.1
WD40-like Beta Propeller Repeat.
  
    0.759
SFT67839.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.758
SFT67489.1
Hypothetical protein.
  
     0.756
SFT86330.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.756
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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