STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT89748.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
SFT47914.1
Tellurite resistance protein TerB.
  
 0.999
SFT50517.1
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.910
SFT39669.1
Ankyrin repeat.
 
 0.904
SFT50367.1
Leucine rich repeat-containing protein.
 
     0.799
SFT89758.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
       0.773
SFT52118.1
WD-40 repeat-containing protein.
  
 
  0.751
SFT55055.1
Lipid A phosphate methyltransferase.
  
 
 0.751
SFT54650.1
Adenylate cyclase, class 3; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
 
 0.741
SFT54518.1
Hypothetical protein.
  
 0.740
SFT46411.1
Hypothetical protein; Non-canonical start codon; manually curated.
   
  0.719
Your Current Organism:
Lishizhenia tianjinensis
NCBI taxonomy Id: 477690
Other names: CGMCC 1.7005, JCM 15141, L. tianjinensis, Lishizhenia tianjinensis Chen et al. 2009, marine bacterium H6, strain H6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.