STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CitRUnannotated protein. (312 aa)    
Predicted Functional Partners:
CitC
Unannotated protein; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
    0.657
AYP77_08475
Unannotated protein.
       0.625
citD
Unannotated protein; Covalent carrier of the coenzyme of citrate lyase.
 
    0.600
AEL95_07950
Unannotated protein.
 
     0.587
citX
Unannotated protein.
 
     0.574
CitF
Unannotated protein.
 
    0.499
citG
Unannotated protein.
 
     0.485
GCA_001567095_00931
Unannotated protein.
       0.433
PenP
Unannotated protein.
  
     0.429
GCA_001567095_00307
Unannotated protein.
     
 0.407
Your Current Organism:
Lactobacillus crispatus
NCBI taxonomy Id: 47770
Other names: ATCC 33820, CCUG 30722, CIP 102990, CIPP II, DSM 20584, Eubacterium crispatum, L. crispatus, LMG 9479, LMG:9479, VPI 3199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.