STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MalKUnannotated protein; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
MalG
Unannotated protein.
 
 0.991
MalE2
Unannotated protein.
 
 0.981
MalF
Unannotated protein.
 
 0.978
MsmF
Unannotated protein.
 
 0.977
MsmG
Unannotated protein.
 
 0.972
MsmE
Unannotated protein.
  
 0.914
ERD32_05030
Unannotated protein; Belongs to the ABC transporter superfamily.
  
  
 
0.911
ugpC
Unannotated protein; Belongs to the ABC transporter superfamily.
  
  
 
0.901
CEE75_09385
Unannotated protein.
     
0.899
AYP78_07030
Unannotated protein.
 
 
 0.870
Your Current Organism:
Lactobacillus crispatus
NCBI taxonomy Id: 47770
Other names: ATCC 33820, CCUG 30722, CIP 102990, CIPP II, DSM 20584, Eubacterium crispatum, L. crispatus, LMG 9479, LMG:9479, VPI 3199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.