Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_008815RRM domain-containing protein. (248 aa)    
Predicted Functional Partners:
CCR75_003485
Uncharacterized protein.
    
 0.868
CCR75_002327
Uncharacterized protein.
    
 0.727
CCR75_005495
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.687
CCR75_000984
Uncharacterized protein.
    
 0.678
CCR75_009397
Sm domain-containing protein.
    
 0.673
CCR75_007248
Small nuclear ribonucleoprotein G.
    
 0.670
CCR75_002823
Uncharacterized protein.
    
 0.661
CCR75_000679
G-patch domain-containing protein.
    
  0.652
CCR75_003794
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.648
CCR75_005259
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.644
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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